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Citing CMDGA
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Annotation type
818
chromatin state
371
accessible chromatin
281
target gene predictions
120
eQTL
105
histone modifications
63
Fine-mapped variants
9
gene expression
6
binding sites
5
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
3
snATAC-seq
2
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
CD4-positive helper T cell
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
Organ
3
blood vessel
3
vasculature
2
artery
heart
1
connective tissue
1
epithelium
Date released
3
February, 2023
2
October, 2022
Software used
3
rasqual
2
matrix-eQTL
Lab
3
AMP-T2D consortium
2
Stephen S. Rich Lab @UVA
Project
3
AMP
2
T1D
RFA
3
AMP
2
T1D
organ_slims!
heart
Showing 5 of 5 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D