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Citing CMDGA
Clear Filters
Annotation type
1668
candidate regulatory elements
1322
target gene predictions
977
histone modifications
941
chromatin state
817
binding sites
682
gene expression
598
accessible chromatin
169
eQTL
167
differential activity
81
variant allelic effects
71
Fine-mapped variants
5
hQTL
5
sQTL
4
variant to gene
3
caQTL
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
snATAC-seq
3
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
2
CD4-positive helper T cell
coronary artery
1
liver
Organ
1
liver
Date released
2
October, 2022
1
May, 2022
Software used
2
matrix-eQTL
1
eigenmt
1
rasqual
Lab
2
Stephen S. Rich Lab @UVA
1
Karen Mohlke, UNC
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
biosample_term_name!
coronary artery
annotation_type_category!
snATAC-seq
Showing 3 of 3 results
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FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D