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Citing CMDGA
Clear Filters
Annotation type
466
gene expression
152
differential activity
35
eQTL
6
caQTL
5
variant allelic effects
1
accessible chromatin
1
sQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
4
snATAC-seq
2
ATAC-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
GRCh38
hg19
Organism
6
Homo sapiens
Biosample type
6
primary cell
1
tissue
Biosample term
2
CD4-positive helper T cell
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
2
blood vessel
2
vasculature
1
artery
1
connective tissue
1
epithelium
1
heart
Date released
4
February, 2023
2
October, 2022
Software used
4
rasqual
2
matrix-eQTL
Lab
4
AMP-T2D consortium
2
Stephen S. Rich Lab @UVA
Project
4
AMP
2
T1D
RFA
4
AMP
2
T1D
assembly!
hg19
Showing 6 of 6 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D