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Schema
Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1070
target gene predictions
977
histone modifications
873
chromatin state
810
binding sites
564
accessible chromatin
445
gene expression
159
eQTL
82
variant allelic effects
74
Fine-mapped variants
6
differential activity
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
1
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
5
Genetic variant effects
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
Date released
5
February, 2023
Software used
5
rasqual
Lab
5
AMP-T2D consortium
5
Stephen Parker, UMich
2
Stephen S. Rich Lab @UVA
Project
5
AMP
RFA
5
AMP
month_released!
May, 2022
Showing 5 of 5 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP