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Citing CMDGA
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Annotation type
91
binding sites
34
chromatin state
14
accessible chromatin
8
caQTL
3
variant allelic effects
Annotation Category
8
Genetic variant effects
Annotation type Category
5
snATAC-seq
3
ATAC-seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
tissue
Biosample term
2
CD4-positive helper T cell
1
endothelial cell
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
1
liver
Date released
7
October, 2022
5
February, 2023
1
May, 2022
Software used
6
eigenmt
6
rasqual
2
matrix-eQTL
Lab
5
Stephen Parker, UMich
2
Stephen S. Rich Lab @UVA
1
Karen Mohlke, UNC
Project
6
AMP
2
T1D
RFA
5
AMP2
2
T1D
1
AMP
Showing 8 of 8 results
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FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP