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Citing CMDGA
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Annotation type
270
accessible chromatin
50
variant allelic effects
31
target gene predictions
7
caQTL
Annotation Category
7
Genetic variant effects
Annotation type Category
7
snATAC-seq
4
ATAC-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
2
endothelial cell
1
macrophage
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
blood vessel
connective tissue
2
epithelium
2
musculature of body
2
vasculature
1
artery
1
heart
Date released
4
October, 2022
3
February, 2023
Software used
7
rasqual
4
eigenmt
Lab
4
Stephen Parker, UMich
3
AMP-T2D consortium
Project
7
AMP
RFA
4
AMP2
3
AMP
organ_slims!
connective tissue
Showing 7 of 7 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP