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Schema
Citing CMDGA
Clear Filters
Annotation type
1621
candidate regulatory elements
1183
target gene predictions
969
histone modifications
911
chromatin state
796
binding sites
569
accessible chromatin
448
gene expression
154
eQTL
124
variant allelic effects
65
Fine-mapped variants
44
differential activity
5
hQTL
5
sQTL
4
variant to gene
3
caQTL
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
endothelial cell
1
liver
1
macrophage
Organ
3
blood vessel
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
1
liver
Date released
2
February, 2023
1
May, 2022
Software used
3
rasqual
1
eigenmt
Lab
2
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
3
AMP
RFA
5
AMP2
3
AMP
2
T1D
organ_slims!
vasculature
Showing 3 of 3 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP