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Schema
Citing CMDGA
Clear Filters
Annotation type
115
candidate regulatory elements
113
accessible chromatin
101
target gene predictions
74
chromatin state
74
gene expression
45
binding sites
30
histone modifications
26
differential activity
25
eQTL
25
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
3
snATAC-seq
1
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
coronary artery
1
fibroblast of the aortic adventitia
1
mesenchymal stem cell
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
3
February, 2023
1
October, 2022
Software used
4
rasqual
1
eigenmt
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
3
AMP
1
AMP2
Showing 4 of 4 results
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FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP