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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
candidate regulatory elements
3
gene expression
3
target gene predictions
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
4
cis-regulatory elements
2
Gene expression levels
Annotation type Category
4
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Available data
4
bed bed3+
2
tsv
File set status
6
released
Genome assembly (visualization)
4
hg19
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
2
Lymphatic Endothelial Cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
215
kidney
192
epithelium
147
musculature of body
131
lung
113
intestine
111
brain
94
connective tissue
94
limb
75
skin of body
70
heart
69
large intestine
68
vasculature
59
extraembryonic component
57
embryo
57
pancreas
51
blood vessel
51
stomach
47
bodily fluid
43
blood
37
small intestine
31
ureter
29
placenta
28
adrenal gland
28
mammary gland
28
penis
27
liver
27
prostate gland
25
bone element
21
adipose tissue
21
lymph node
20
thymus
18
eye
17
esophagus
17
gonad
16
spinal cord
15
spleen
12
artery
9
lymphoid tissue
9
testis
9
uterus
8
mouth
8
ovary
8
thyroid gland
6
lymphatic vessel
6
nerve
6
vein
5
breast
4
bronchus
4
skeleton
4
tongue
4
vagina
3
urinary bladder
2
bone marrow
1
nose
Life stage
4
unknown
2
adult
Date released
2
February, 2021
2
September, 2022
2
September, 2023
Software used
2
deseq2
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
2
KPMP
Project
4
AMP
2
KPMP
RFA
4
AMP
2
KPMP
biosample_term_name!
skeletal muscle myoblast
Showing 6 of 6 results
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Download
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR150ZKD
released
Annotation file set
: Candidate regulatory elements for BSS00264 dermis lymphatic vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608OEX
released
Annotation file set
: Candidate regulatory elements for BSS00262 dermis lymphatic vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR307XVK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570CLQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP