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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
40
common myeloid progenitor, CD34-positive
39
A549
29
hematopoietic multipotent progenitor cell
23
CD4-positive, alpha-beta memory T cell
22
B cell
19
stomach
18
adrenal gland
18
spleen
17
liver
15
CD8-positive, alpha-beta memory T cell
15
foreskin keratinocyte
15
sigmoid colon
14
K562
14
MCF-7
13
adipose tissue
13
heart left ventricle
13
mononuclear cell
12
CD14-positive monocyte
12
body of pancreas
12
gastrocnemius medialis
12
thyroid gland
12
transverse colon
11
CD4-positive, alpha-beta T cell
11
endocrine pancreas
11
endothelial cell of umbilical vein
11
psoas muscle
10
Peyer's patch
10
adipocyte
10
fibroblast of lung
10
layer of hippocampus
10
temporal lobe
10
tibial nerve
10
upper lobe of left lung
9
T-helper 1 cell
9
caudate nucleus
9
foreskin fibroblast
9
natural killer cell
9
ovary
9
skeletal muscle tissue
9
small intestine
8
CD8-positive, alpha-beta T cell
8
HeLa-S3
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
angular gyrus
8
aorta
8
dermis blood vessel endothelial cell
8
esophagus squamous epithelium
8
heart right ventricle
8
lower leg skin
8
pancreas
8
regulatory T cell
8
substantia nigra
7
ascending aorta
7
breast epithelium
7
cingulate gyrus
7
colonic mucosa
7
duodenal mucosa
7
esophagus muscularis mucosa
7
fibroblast of dermis
7
kidney
7
lung
7
mature neutrophil
7
mucosa of rectum
7
omental fat pad
7
parathyroid adenoma
7
skeletal muscle myoblast
7
stomach smooth muscle
7
thoracic aorta
6
22Rv1
6
SK-N-DZ
6
SK-N-SH
6
WI38
6
bronchial epithelial cell
6
coronary artery
6
endometrium adenocarcinoma
6
epithelial cell of prostate
6
esophagus
6
fibroblast of breast
6
gastroesophageal sphincter
6
heart
6
immortal human breast epithelial cell line cell
6
keratinocyte
6
mammary gland epithelial cell
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
prostate gland
6
subcutaneous abdominal adipose tissue
6
testis
6
tibial artery
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
LNCaP clone FGC
5
T47D
5
cerebellum
5
embryonic stem cell
5
foreskin melanocyte
5
kidney tubule cell
5
left cardiac atrium
5
right atrium auricular region
5
right cardiac atrium
4
Brodmann (1909) area 46
4
GM12878
4
HepG2
4
NAMALWA cell
4
T-cell
4
alternatively activated macrophage
4
dermis lymphatic vessel endothelial cell
4
fibroblast of cardiac tissue
4
frontal cortex
4
lung microvascular endothelial cell
4
mammary epithelial cell
4
mesenchymal stem cell
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
peripheral blood mononuclear cell
4
skeletal muscle satellite cell
4
uterus
3
A172
3
A673
3
ACC112
3
ACHN
3
Ammon's horn
3
C4-2B
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELR
3
G401
3
GM04503
3
GM04504
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM23248
3
GM23338
3
H4
3
H54
3
HAP-1
3
HCT116
3
HL-60
3
HS-27A
3
HS-5
3
HT-29
3
HT1080
3
KARPAS-422 cell
3
KBM-7
3
KMS-11
3
KOPT-K1
3
L1-S8
3
LHCN-M2
3
Loucy
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NB4
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
Panc1
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
RWPE2
3
SJCRH30
3
SJSA1
3
SK-MEL-5
3
SK-N-MC
3
SU-DHL-6
3
SW480
3
WERI-Rb-1
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
bipolar neuron
3
brain microvascular endothelial cell
3
cerebellar cortex
3
choroid plexus epithelial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
Life stage
4
adult
Date released
4
September, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
embryonic
Showing 4 of 4 results
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Download
FileSet
DSR552UYW
released
Annotation file set
: Candidate regulatory elements for BSS01344 muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR232PMO
released
Annotation file set
: Candidate regulatory elements for BSS01338 muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR710AEI
released
Annotation file set
: Chromatin states for BSS01344 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR091AYF
released
Annotation file set
: Chromatin states for BSS01338 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP