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Citing CMDGA
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Annotation type
4
candidate regulatory elements
2
accessible chromatin
2
binding sites
2
target gene predictions
1
histone modifications
1
variant allelic effects
0
chromatin state
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
3
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
bronchial goblet cell
Organ
44
epithelium
23
brain
23
connective tissue
16
kidney
16
vasculature
15
pancreas
10
blood vessel
10
heart
10
musculature of body
8
limb
7
intestine
7
liver
5
adipose tissue
4
artery
3
large intestine
3
stomach
3
ureter
2
blood
2
bodily fluid
2
esophagus
2
eye
2
lung
2
mammary gland
2
nerve
2
skin of body
2
vein
1
adrenal gland
1
bone element
1
bone marrow
1
bronchus
1
embryo
1
prostate gland
1
small intestine
1
thyroid gland
Date released
1
February, 2024
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
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Download
FileSet
DSR915JYD
released
Annotation file set
: Variant allelic effects annotation of Airway goblet cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP