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Schema
Citing CMDGA
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Annotation type
6
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
cell line
Biosample term
2
tongue
1
ACC112
Disease term
1
adenoid cystic carcinoma
Organ
73
kidney
72
musculature of body
68
brain
65
lung
55
intestine
50
heart
50
limb
32
connective tissue
32
large intestine
30
extraembryonic component
28
embryo
28
epithelium
28
skin of body
24
blood vessel
24
bodily fluid
24
stomach
24
vasculature
22
blood
20
small intestine
16
liver
15
pancreas
15
placenta
14
adrenal gland
13
mammary gland
13
ureter
12
bone element
11
thymus
10
adipose tissue
10
penis
9
prostate gland
7
gonad
7
spinal cord
6
artery
6
esophagus
6
eye
6
spleen
5
lymph node
5
vein
4
lymphoid tissue
4
nerve
4
ovary
4
thyroid gland
4
uterus
3
mouth
3
skeleton
3
testis
2
breast
2
tongue
2
urinary bladder
2
vagina
1
bone marrow
1
nose
Life stage
2
embryonic
1
adult
unknown
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
mucosa of rectum
relevant_life_stage!
unknown
Showing 3 of 3 results
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Download
FileSet
DSR981JBX
released
Annotation file set
: Chromatin states for BSS00036 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR744RHI
released
Annotation file set
: Chromatin states for BSS01846 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR992FWK
released
Annotation file set
: Chromatin states for BSS01845 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP