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Schema
Citing CMDGA
Clear Filters
Annotation type
22
gene expression
20
accessible chromatin
12
binding sites
12
histone modifications
10
target gene predictions
8
candidate regulatory elements
7
chromatin state
4
variant allelic effects
3
differential activity
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bed bed9
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
tissue
4
cell line
2
primary cell
1
in vitro differentiated cells
Biosample term
2
HepG2
2
hepatocyte
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
Disease term
3
hepatocellular carcinoma
Organ
49
epithelium
38
connective tissue
32
skin of body
28
lung
27
bodily fluid
25
blood
21
embryo
17
vasculature
15
brain
15
kidney
15
mammary gland
12
blood vessel
12
bone element
11
prostate gland
10
extraembryonic component
10
penis
8
lymph node
7
liver
6
musculature of body
5
vein
4
eye
4
intestine
4
large intestine
3
heart
3
pancreas
3
uterus
2
artery
2
bone marrow
2
bronchus
2
lymphatic vessel
2
mouth
2
placenta
1
esophagus
1
gonad
1
limb
1
lymphoid tissue
1
nose
1
spinal cord
1
testis
Life stage
3
adult
1
child
1
embryonic
1
unknown
Date released
6
September, 2022
1
August, 2017
Software used
7
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
biosample_type!
tissue
biosample_term_name!
Caki2
Showing 7 of 7 results
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Download
FileSet
DSR681QPX
released
Annotation file set
: Chromatin states for BSS00719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR425WPB
released
Annotation file set
: Chromatin states for BSS00718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642PKA
released
Annotation file set
: Chromatin states for BSS00556 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607QDA
released
Annotation file set
: Chromatin states for BSS00554 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR130QHH
released
Annotation file set
: Chromatin states for BSS00553 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP