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Schema
Citing CMDGA
Clear Filters
Annotation type
16
target gene predictions
15
accessible chromatin
10
candidate regulatory elements
5
binding sites
4
chromatin state
4
histone modifications
3
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
tissue
4
cell line
Biosample term
1
HCT116
1
HT-29
1
SW480
1
colon epithelial cell
Disease term
3
colorectal adenocarcinoma
Organ
49
epithelium
38
connective tissue
32
skin of body
28
lung
27
bodily fluid
25
blood
21
embryo
17
vasculature
16
kidney
15
brain
15
mammary gland
12
blood vessel
12
bone element
11
prostate gland
10
extraembryonic component
10
penis
8
lymph node
7
liver
6
musculature of body
5
vein
4
eye
4
intestine
4
large intestine
3
heart
3
pancreas
3
uterus
2
artery
2
bone marrow
2
bronchus
2
lymphatic vessel
2
mouth
2
placenta
1
esophagus
1
gonad
1
limb
1
lymphoid tissue
1
nose
1
spinal cord
1
testis
Life stage
3
adult
1
unknown
Date released
4
September, 2022
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
files.file_type!
bam
biosample_type!
tissue
Showing 4 of 4 results
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Download
FileSet
DSR361WKN
released
Annotation file set
: Chromatin states for BSS01682 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895ABN
released
Annotation file set
: Chromatin states for BSS00708 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815ZTC
released
Annotation file set
: Chromatin states for BSS00492 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024YCW
released
Annotation file set
: Chromatin states for BSS00223 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP