Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1070
target gene predictions
976
histone modifications
810
binding sites
566
accessible chromatin
66
variant allelic effects
5
caQTL
4
eQTL
3
chromatin state
3
hQTL
2
meQTL
2
variant to gene
1
other
1
pQTL
1
sQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
869
bed bed9
40
bigBed bed9
34
bed bed9+
3
bed bed3+
2
bigWig
1
bam
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
1
islet of Langerhans
1
pancreas
1
subcutaneous abdominal adipose tissue
Organ
2
pancreas
1
adipose tissue
1
connective tissue
Date released
3
August, 2017
Software used
3
chromhmm
Lab
31
Stephen Parker, UMich
5
Patrick T. Ellinor, Broad
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
TSTSR608480
released
Annotation file set
: ChromHMM 18-state model for Pancreas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR033945
released
Annotation file set
: ChromHMM 18-state model for Adipose Nuclei
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR043890
released
Annotation file set
: ChromHMM 18-state model for Islets
Lab:
AMP-T2D consortium
Project:
AMP