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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
3
target gene predictions
2
candidate regulatory elements
2
chromatin state
1
binding sites
1
histone modifications
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
foreskin keratinocyte
8
keratinocyte
7
fibroblast of dermis
5
foreskin fibroblast
5
skin fibroblast
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
lower leg skin
3
iPS DF 19.11
2
COLO829
2
GM23248
2
RPMI7951
2
SK-MEL-5
2
epidermal melanocyte
2
iPS DF 19.7
2
iPS DF 4.7 Cell Line
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
skin of body
1
basal cell of epidermis
1
fibroblast of arm
1
granular cell of epidermis
Organ
5
connective tissue
5
skin of body
Life stage
4
embryonic
Date released
4
September, 2022
1
November, 2021
Software used
2
chromhmm
2
r
1
abc
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR179ALT
released
Annotation file set
: Target gene predictions for BSS01583 skin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR826GFX
released
Annotation file set
: Target gene predictions for BSS00346 skin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR253KGL
released
Annotation file set
: Chromatin states for BSS01583 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378XAB
released
Annotation file set
: Chromatin states for BSS00346 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR734CMY
released
Annotation file set
: Target gene predictions of Fibroblast (Epithelial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE