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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
candidate regulatory elements
3
gene expression
3
target gene predictions
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
single cell RNA-seq
Available data
2
bed bed9
2
tsv
File set status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
Lymphatic Endothelial Cell
2
dermis lymphatic vessel endothelial cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
145
epithelium
133
kidney
75
musculature of body
72
brain
71
lung
62
connective tissue
59
intestine
51
heart
51
vasculature
50
limb
50
pancreas
40
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
21
liver
20
small intestine
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
12
adipose tissue
11
thymus
10
artery
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
2
adult
2
unknown
Date released
2
September, 2022
2
September, 2023
Software used
2
chromhmm
2
deseq2
Lab
2
AMP-T2D consortium
2
KPMP
Project
2
AMP
2
KPMP
RFA
2
AMP
2
KPMP
annotation_type!
variant allelic effects
Showing 4 of 4 results
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Download
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR492AJM
released
Annotation file set
: Chromatin states for BSS00264 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019ZDM
released
Annotation file set
: Chromatin states for BSS00262 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP