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Annotation type
6
eQTL
5
hQTL
3
meQTL
3
sQTL
2
pQTL
1
other
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
3
primary cell
3
tissue
Biosample term
2
cartilage tissue
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
synovial joint
Organ
2
connective tissue
Life stage
6
adult
Date released
3
August, 2021
3
May, 2021
Software used
110
qTLtools
23
gtex_eqtl:V8
11
matrix-eQTL
6
fastqtl
5
unknown
3
limix
3
mach2qtl
3
peer
3
r
2
emmax
1
bimbam
1
epacts
1
fast-lmm
1
haploview
1
probabel
1
snap
Lab
3
AMP-T2D consortium
3
ITG
Project
3
AMP
3
ITG
RFA
3
AMP
3
ITG
biosample_term_name!
frontal cortex
Showing 6 of 6 results
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FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR595CTR
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792EUZ
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP