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Citing CMDGA
Clear Filters
Annotation type
421
accessible chromatin
322
target gene predictions
279
candidate regulatory elements
198
histone modifications
170
chromatin state
79
binding sites
66
variant allelic effects
10
gene expression
8
eQTL
5
hQTL
4
caQTL
3
meQTL
2
sQTL
1
other
Annotation Category
8
Genetic variant effects
Annotation type Category
8
RNA-seq
1
Expression arrays
Available data
4
bed bed3+
File set status
8
released
Genome assembly (visualization)
32
GRCh38
8
hg19
Organism
8
Homo sapiens
Biosample type
44
tissue
8
primary cell
Biosample term
1
endothelial cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
progenitor cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
connective tissue
1
epithelium
Life stage
4
adult
Date released
4
February, 2024
3
May, 2021
1
August, 2021
Software used
4
qTLtools
3
limix
1
unknown
Lab
4
AMP-T2D consortium
4
Stephen Parker, UMich
Project
8
AMP
RFA
4
AMP
4
AMP2
organ_slims!
connective tissue
Showing 8 of 8 results
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Download
FileSet
DSR162XRT
released
Annotation file set
: eQTL annotation of islet of Langerhans from PMID:26287746
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR595CTR
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792EUZ
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829NMX
released
Annotation file set
: Expression QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR355IUU
released
Annotation file set
: Expression QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR727SYE
released
Annotation file set
: Expression QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP