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Schema
Citing CMDGA
Clear Filters
Annotation type
27
candidate regulatory elements
16
target gene predictions
15
chromatin state
3
accessible chromatin
2
histone modifications
1
binding sites
1
eQTL
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
placenta
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
Organ
215
epithelium
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Date released
2
November, 2021
1
January, 2022
1
June, 2020
Software used
3
macs
1
qTLtools
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
organ_slims!
connective tissue
Showing 4 of 4 results
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Download
FileSet
DSR912BIG
released
Annotation file set
: placenta naive eQTL of studay Peng_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR100TUS
released
Annotation file set
: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR953MXQ
released
Annotation file set
: Accessible chromatin annotation for Placenta Placenta from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP