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Schema
Citing CMDGA
Clear Filters
Annotation type
50
accessible chromatin
16
candidate regulatory elements
8
chromatin state
8
target gene predictions
4
binding sites
3
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
3
cell line
2
tissue
Biosample term
2
WERI-Rb-1
2
retina
retinal pigment epithelial cell
1
retinal cell
Organ
294
epithelium
209
kidney
80
connective tissue
57
vasculature
53
pancreas
47
bodily fluid
46
blood
41
blood vessel
37
liver
35
brain
26
heart
23
embryo
20
skin of body
18
musculature of body
15
adipose tissue
14
artery
12
bone element
12
lymph node
12
mammary gland
10
lung
9
intestine
9
prostate gland
8
large intestine
7
limb
7
penis
6
uterus
5
eye
5
gonad
5
lymphatic vessel
4
testis
4
vein
3
extraembryonic component
3
placenta
3
spinal cord
2
bone marrow
2
bronchus
2
esophagus
2
nerve
2
spleen
2
stomach
2
trachea
1
adrenal gland
1
breast
1
lymphoid tissue
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
thymus
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
Life stage
1
adult
Date released
3
February, 2021
1
February, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
retinal pigment epithelial cell
Showing 5 of 5 results
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Download
FileSet
DSR230GOE
released
Annotation file set
: Binding sites annotation for WERI-Rb-1 (WERI-Rb-1) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035VRO
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_retinal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394RDK
released
Annotation file set
: Binding sites annotation for Others WERI-Rb-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR112UVC
released
Annotation file set
: Binding sites annotation for Neural Retina from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180OYG
released
Annotation file set
: Gene expression summary of TPM of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP