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Citing CMDGA
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Annotation type
59
accessible chromatin
18
candidate regulatory elements
9
chromatin state
9
target gene predictions
6
binding sites
4
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
2
retina
1
retinal pigment epithelial cell
Organ
294
epithelium
218
kidney
65
connective tissue
59
pancreas
51
vasculature
36
brain
34
blood vessel
31
heart
28
liver
18
musculature of body
16
adipose tissue
13
limb
12
artery
10
embryo
6
intestine
4
bone element
4
esophagus
4
nerve
4
stomach
3
eye
3
lymphatic vessel
3
skin of body
3
ureter
2
adrenal gland
2
gonad
2
large intestine
2
lung
2
prostate gland
2
thyroid gland
2
uterus
2
vein
1
blood
1
bodily fluid
1
breast
1
bronchus
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
spinal cord
1
spleen
1
testis
1
tongue
1
urinary bladder
1
vagina
Life stage
1
adult
Date released
2
May, 2020
1
February, 2020
Software used
2
deltasvm
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR787MHT
released
Annotation file set
: Genetic variants with deltaSVM predictions in retinal pigment epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757CEL
released
Annotation file set
: Genetic variants with deltaSVM predictions in retina DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180OYG
released
Annotation file set
: Gene expression summary of TPM of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP