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Schema
Citing CMDGA
Clear Filters
Annotation type
23
candidate regulatory elements
16
gene expression
16
target gene predictions
13
eQTL
12
chromatin state
11
accessible chromatin
6
Fine-mapped variants
4
binding sites
4
differential activity
3
variant allelic effects
2
histone modifications
Annotation Category
4
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
RNA-seq
2
single cell RNA-seq
Available data
4
tsv
2
bed bed3+
File set status
6
released
Genome assembly (visualization)
2
hg19
Organism
6
Homo sapiens
Biosample type
2
cell line
2
primary cell
2
tissue
Biosample term
2
Lymphatic Endothelial Cell
1
adipose tissue derived mesenchymal stem cell
1
dermis lymphatic vessel endothelial cell
1
subcutaneous adipose tissue
1
visceral abdominal adipose tissue
Disease term
2
coronary artery disease
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
120
epithelium
62
kidney
48
brain
39
connective tissue
39
pancreas
26
vasculature
25
bodily fluid
24
blood
18
blood vessel
18
liver
13
skin of body
11
embryo
8
intestine
8
musculature of body
7
artery
7
prostate gland
6
bone element
6
heart
5
extraembryonic component
5
large intestine
5
mammary gland
5
penis
4
eye
4
lung
4
lymph node
3
adipose tissue
3
lymphatic vessel
3
placenta
2
bone marrow
2
limb
2
trachea
2
uterus
1
bronchus
1
gonad
1
lymphoid tissue
1
pituitary gland
1
stomach
1
testis
1
thymus
1
vein
Life stage
4
adult
Date released
2
February, 2021
2
February, 2024
2
September, 2023
Software used
4
deseq2
2
macs
Lab
4
AMP-T2D consortium
2
KPMP
Project
4
AMP
2
KPMP
RFA
4
AMP
2
KPMP
Showing 6 of 6 results
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Download
FileSet
DSR483AIN
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for visceral abdominal adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR898ATG
released
Annotation file set
: Histone modifications annotation for Others LEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180ISW
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipose-Derived_Mesenchymal_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP