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Annotation type
904
chromatin state
72
Fine-mapped variants
53
eQTL
12
gene expression
2
accessible chromatin
2
hQTL
2
sQTL
1
meQTL
1
pQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
2
adult
Date released
2
May, 2021
Software used
2
limix
2
sqtlseeker
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
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FileSet
DSR631VBI
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP