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Citing CMDGA
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Annotation type
671
gene expression
167
differential activity
108
eQTL
16
variant allelic effects
8
accessible chromatin
7
caQTL
2
Fine-mapped variants
2
variant to gene
1
binding sites
1
histone modifications
1
other
1
representative DNase hypersensitivity sites
1
sQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
RNA-seq
File set status
1
released
Genome assembly (visualization)
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
islet of Langerhans
Organ
1
pancreas
Date released
1
March, 2023
Software used
1
limix
1
qTLtools
sqtlseeker
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
software_used.software.name!
sqtlseeker
assembly!
hg19
Showing 1 of 1 results
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FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP