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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
eQTL
1
gene expression
Annotation Category
5
cis-regulatory elements
3
Target gene links
Annotation type Category
8
DNase-seq
7
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
8
breast epithelium
Organ
234
kidney
226
musculature of body
222
epithelium
209
lung
187
brain
186
intestine
158
connective tissue
143
limb
141
embryo
119
heart
119
skin of body
113
large intestine
104
bodily fluid
98
blood
95
extraembryonic component
81
stomach
81
vasculature
68
pancreas
67
uterus
64
blood vessel
60
small intestine
49
adrenal gland
47
mammary gland
46
placenta
44
liver
44
ureter
42
prostate gland
41
bone element
39
penis
34
thymus
32
adipose tissue
30
lymph node
28
gonad
27
esophagus
27
eye
25
spinal cord
23
spleen
18
artery
15
lymphoid tissue
15
ovary
14
thyroid gland
13
testis
12
mouth
10
pituitary gland
10
vein
9
nerve
8
breast
7
bronchus
7
lymphatic vessel
7
skeleton
6
tongue
6
urinary bladder
6
vagina
5
bone marrow
2
nose
Life stage
7
adult
Date released
4
September, 2022
3
February, 2021
1
May, 2021
Software used
4
r
3
encode-ccres
1
abc
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
annotation_type!
eQTL
Showing 8 of 8 results
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Download
FileSet
DSR592FRB
released
Annotation file set
: Candidate regulatory elements for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR385CMS
released
Annotation file set
: Candidate regulatory elements for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572SDG
released
Annotation file set
: Target gene predictions for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097ZWH
released
Annotation file set
: Target gene predictions for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751KRC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027WWM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR278EXR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097EPN
released
Annotation file set
: enhancer-gene predicton of breast_epithelium-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP