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Schema
Citing CMDGA
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Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
1
histone modifications
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
endothelial cell of umbilical vein
Organ
117
epithelium
76
embryo
66
connective tissue
57
bodily fluid
56
uterus
55
blood
41
skin of body
34
lung
29
brain
29
pancreas
19
mammary gland
18
vasculature
16
intestine
16
kidney
13
bone element
13
prostate gland
12
blood vessel
12
extraembryonic component
11
large intestine
11
penis
10
liver
10
musculature of body
10
pituitary gland
9
lymph node
8
heart
4
adrenal gland
4
eye
4
stomach
4
vein
3
artery
3
bone marrow
3
bronchus
3
esophagus
3
lymphatic vessel
2
gonad
2
limb
2
lymphoid tissue
2
mouth
2
placenta
2
small intestine
1
adipose tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thyroid gland
Life stage
2
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
annotation_type!
other
biosample_type!
tissue
Showing 4 of 4 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP