Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
0
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
56
HeLa-S3
41
H1-hESC
25
K562
21
A549
19
HFFc6
10
GM12878
10
pituitary stalk
9
MCF-7
9
breast cancer cell
8
H9
7
fibroblast cell line
7
lymphocyte
7
melanoma
6
HepG2
5
HUES8
5
iPSC derived cell line
5
prostate cancer cell line
4
CyT49
4
GM19238
4
GM19239
4
GM19240
4
IMR-90
4
Jurkat
4
SK-N-SH
4
glioblastoma multiforme cancer stem cell
4
neural progenitor cell
4
neuroblastoma cell
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
BJAB cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM19099
3
GM19193
3
HAP-1
3
HCT-116 cell
3
HCT116
3
HEK293
3
HL-60
3
HT-29
3
KARPAS-422 cell
3
LoVo cell
3
MCF 10A cell
3
MM.1S
3
NAMALWA cell
3
NT2-D1 cell
3
OCI-LY7
3
PC-9
3
SK-N-MC
3
THP-1
3
Tumor-derived cell line
3
U937
3
WERI-Rb-1
3
acute myeloid leukemia
3
dermal fibroblast
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
liposarcoma
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A673
2
B-lymphoblastoid cell line
2
Burkitt's lymphoma
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
EndoC_BH1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18507
2
GM18526
2
GM18951
2
GM23248
2
H7-hESC
2
HAC cell
2
HBMEC cell
2
HEK293-T-REx cell
2
HK-2 cell
2
HS-SY-2 cell
2
HUES6
2
HUES64
2
HuH-7
2
KBM-7
2
LHCN-M2
2
LNCAP
2
LNCaP clone FGC
2
MDA-MB-231 cell
2
MG63
2
Mantle cell lymphoma
2
NB4
2
NCCIT cell
2
NCI-H460 cell
2
NHEK
2
Normal Human Astrocytes
2
OCI-LY1
2
OCI-LY3
2
PANC-1 cell
2
PC-3
2
PFSK-1 cell
2
Panc1
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SJSA1
2
SK-MEL-5 cell
2
SK-N-DZ
2
SK-N-SH_RA
2
SUM-185PE cell
2
SW480
2
T-47D cell
2
T-lymphocyte
2
T47D
2
U-87 MG
2
U2OS
2
VCaP cell
2
WI-38 cell
2
adult acute myeloid leukemia
2
cardiac muscle cell
2
chronic myeloid leukemia cell
2
diffuse intrinsic pontine glioma
2
embryonic stem cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
gastric cancer cell
2
glioblastoma cell
2
iPS DF 19.11
2
immortal neural cell line cell
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
macrophage
2
metastatic melanoma
2
pancreatic cancer cell
2
pancreatic cell line
2
prostate derived cell line
2
spinal cord
1
143B
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
8988T
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A172
1
A2780 cell
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG20443
1
AGS cell
1
ALL-SIL cell
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BL-2 cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
Date released
1
February, 2021
1
October, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR788EPW
released
Annotation file set
: Binding sites annotation for SK-N-SH_RA (SK-N-SH_RA) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR190TVQ
released
Annotation file set
: Binding sites annotation for Neural SK-N-SH from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP