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Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
2
pQTL
1
histone modifications
0
target gene predictions
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
22
stomach
19
A549
19
CD14-positive monocyte
19
HFFc6
19
heart
18
adrenal gland
18
brain
18
lung
18
small intestine
17
liver
16
muscle of arm
16
placenta
15
kidney
14
common myeloid progenitor, CD34-positive
14
islet of Langerhans
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
adipose tissue
11
macrophage
11
right lung
10
B cell
10
hematopoietic multipotent progenitor cell
10
pericyte cell
10
pituitary stalk
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
9
spleen
8
GM12878
8
H9
8
endothelial cell
8
heart left ventricle
8
psoas muscle
8
smooth muscle cell
7
CD8-positive, alpha-beta memory T cell
7
lymphocyte
7
monocyte
7
ovary
7
sigmoid colon
7
trophoblast cell
6
MCF-7
6
T cell
6
adipocyte
6
body of pancreas
6
dendritic cell
6
fibroblast
6
iPSC derived cell line
6
lymphoblastoid cell line
6
mononuclear cell
6
natural killer cell
6
olfactory receptor cell
6
pancreas
6
regulatory T cell
6
subcutaneous adipose tissue
6
thyroid gland
6
transverse colon
5
CD8-positive, alpha-beta T cell
5
caudate nucleus
5
coronary artery
5
gastrocnemius medialis
5
heart right ventricle
5
keratinocyte
5
mesenchymal stem cell
5
muscle of trunk
5
neural progenitor cell
5
neutrophil
5
skeletal muscle tissue
5
substantia nigra
5
tibial nerve
4
CyT49
4
HUES8
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
aorta
4
astrocyte
4
cerebellum
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
esophagus
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
frontal cortex
4
hepatocyte
4
layer of hippocampus
4
mammary gland epithelial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
omental fat pad
4
pancreatic delta cell
4
putamen
4
retina
4
right atrium auricular region
4
skin of body
4
testis
4
tibial artery
3
Ammon's horn
3
CD4-positive, alpha-beta T cell
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
blood cell
3
breast epithelium
3
cardiomyocytes (cardiac muscle cell)
3
chorion membrane
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
foreskin fibroblast
3
immortal human breast epithelial cell line cell
3
luminal epithelial cell of mammary gland
3
mesendoderm
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
prostate gland
3
skeletal muscle myoblast
3
skin fibroblast
3
trophoblast
3
type B pancreatic cell
3
upper lobe of left lung
3
uterus
3
vagina
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
2
T47D
2
THP-1
2
U937
2
activated CD8-positive, alpha-beta T cell
2
amygdala
2
angular gyrus
2
anterior cingulate cortex
2
articular chondrocyte
2
bipolar neuron
2
blood
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac muscle cell
2
cartilage tissue
2
cingulate gyrus
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
erythroblast
2
esophagus squamous epithelium
2
eye
2
fat cell
2
fibroblast of breast
2
gabaergic neuron
2
glutamatergic neuron
2
hypothalamus
2
iPS DF 19.11
Organ
2
connective tissue
Life stage
2
adult
Date released
2
August, 2021
Software used
2
fastqtl
2
peer
Lab
2
ITG
Project
2
ITG
RFA
2
ITG
relevant_life_stage!
fetal
Showing 2 of 2 results
table-tab-icon
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FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG