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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
7
target gene predictions
4
chromatin state
2
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
7
Target gene links
1
Genetic variant effects
Annotation type Category
5
DNase-seq
4
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
1
pCHi-C
Available data
7
bed bed3+
File set status
8
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
7
tissue
1
primary cell
Biosample term
7
ovary
1
luteal cell
Organ
125
epithelium
105
brain
99
connective tissue
87
musculature of body
84
embryo
79
kidney
79
lung
76
intestine
59
bodily fluid
59
pancreas
59
uterus
57
blood
55
heart
54
limb
47
skin of body
46
large intestine
37
extraembryonic component
37
vasculature
31
blood vessel
31
stomach
28
liver
26
adipose tissue
24
small intestine
22
adrenal gland
19
mammary gland
18
placenta
16
bone element
16
prostate gland
14
gonad
14
thymus
13
artery
13
esophagus
13
ureter
11
penis
11
pituitary gland
11
spinal cord
10
eye
9
lymph node
9
spleen
8
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
mouth
5
nerve
4
breast
4
vein
3
bone marrow
3
bronchus
3
lymphatic vessel
3
skeleton
3
urinary bladder
3
vagina
2
tongue
1
nose
Life stage
3
adult
1
embryonic
Date released
4
September, 2022
1
January, 2022
1
March, 2020
1
May, 2021
1
November, 2021
Software used
4
r
2
abc
1
nospecificsoft_customcode
1
qTLtools
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
7
AMP
1
ENCODE
RFA
7
AMP
1
ENCODE3
software_used.software.name!
bimbam
Showing 8 of 8 results
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Download
FileSet
DSR249ZSK
released
Annotation file set
: Target gene predictions for BSS01403 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789MNT
released
Annotation file set
: Target gene predictions for BSS01402 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594TVG
released
Annotation file set
: Target gene predictions for BSS01401 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097PMM
released
Annotation file set
: Target gene predictions for BSS01399 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR119ATQ
released
Annotation file set
: ovary eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR547QBE
released
Annotation file set
: enhancer-gene predicton of ovary-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR751JBO
released
Annotation file set
: A target gene prediction annotation in Human Ovary of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP