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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
candidate regulatory elements
3
gene expression
3
target gene predictions
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
3
Gene expression levels
3
Target gene links
Annotation type Category
3
single cell RNA-seq
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
3
tsv
File set status
6
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
3
Lymphatic Endothelial Cell
2
dermis lymphatic vessel endothelial cell
1
endothelial cell of lymphatic vessel
Disease term
1
acute kidney failure
1
chronic kidney disease
Organ
375
epithelium
277
kidney
127
connective tissue
95
brain
94
embryo
92
pancreas
91
musculature of body
79
lung
76
intestine
70
heart
67
vasculature
60
uterus
58
bodily fluid
56
blood
54
limb
50
blood vessel
46
large intestine
46
skin of body
45
liver
36
extraembryonic component
32
stomach
26
adipose tissue
23
small intestine
22
adrenal gland
20
bone element
19
mammary gland
17
placenta
16
artery
16
prostate gland
14
thymus
13
gonad
13
ureter
12
esophagus
11
penis
11
pituitary gland
10
eye
10
spinal cord
9
lymph node
9
spleen
8
ovary
7
lymphoid tissue
7
thyroid gland
6
lymphatic vessel
5
mouth
5
nerve
5
testis
5
vein
4
breast
4
urinary bladder
3
bone marrow
3
bronchus
3
skeleton
3
tongue
3
vagina
1
nose
1
pericardium
Life stage
3
adult
2
unknown
Date released
3
September, 2023
2
September, 2022
1
November, 2021
Software used
5
r
1
abc
Lab
3
KPMP
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
KPMP
2
AMP
1
ENCODE
RFA
3
KPMP
2
AMP
1
ENCODE3
Showing 6 of 6 results
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Download
FileSet
DSR693ABL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR065GDL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR925JNK
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR962ENU
released
Annotation file set
: Target gene predictions for BSS00264 dermis lymphatic vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR569XOR
released
Annotation file set
: Target gene predictions for BSS00262 dermis lymphatic vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR451QZS
released
Annotation file set
: Target gene predictions of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE