Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
6
target gene predictions
5
candidate regulatory elements
5
histone modifications
3
binding sites
3
chromatin state
1
eQTL
Annotation Category
6
Target gene links
Annotation type Category
6
DNase-seq
3
ATAC-seq
3
ChIP-seq
3
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
in vitro differentiated cells
Biosample term
2
trophoblast cell
1
chorion membrane
1
epithelial cell of amnion
1
fibroblast of villous mesenchyme
1
placenta
Organ
120
epithelium
72
connective tissue
60
brain
58
embryo
58
uterus
57
bodily fluid
55
blood
48
intestine
44
pancreas
41
skin of body
39
lung
34
musculature of body
31
large intestine
30
vasculature
27
heart
24
blood vessel
19
mammary gland
18
liver
17
stomach
15
kidney
15
limb
15
prostate gland
13
adipose tissue
13
adrenal gland
13
bone element
11
penis
11
small intestine
10
esophagus
10
pituitary gland
9
gonad
9
lymph node
8
artery
7
spleen
6
extraembryonic component
6
lymphoid tissue
6
ovary
6
thyroid gland
4
eye
4
thymus
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
testis
2
mouth
2
placenta
2
spinal cord
2
urinary bladder
2
vagina
1
nose
Life stage
embryonic
3
unknown
Date released
3
May, 2021
3
September, 2022
Software used
3
abc
3
r
Lab
3
AMP-T2D consortium
3
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
biosample_term_name!
blood vessel smooth muscle cell
relevant_life_stage!
embryonic
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR488HWF
released
Annotation file set
: Target gene predictions for BSS00350 fibroblast of villous mesenchyme from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096WZL
released
Annotation file set
: Target gene predictions for BSS00209 chorion membrane from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR969TYI
released
Annotation file set
: Target gene predictions for BSS00075 epithelial cell of amnion from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR831KJP
released
Annotation file set
: enhancer-gene predicton of placenta-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP