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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
variant allelic effects
1
chromatin state
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
7
tissue
3
primary cell
Biosample term
2
smooth muscle cell of the esophagus
1
epithelial cell of esophagus
Organ
111
epithelium
50
connective tissue
26
skin of body
24
pancreas
18
vasculature
12
blood vessel
9
extraembryonic component
9
kidney
8
heart
8
intestine
8
lung
8
mammary gland
7
penis
5
embryo
5
musculature of body
4
adrenal gland
4
brain
4
liver
4
stomach
4
vein
3
artery
3
bone element
3
bone marrow
3
bronchus
3
esophagus
3
eye
3
large intestine
3
lymphatic vessel
3
prostate gland
2
small intestine
1
gonad
1
limb
1
mouth
1
ovary
1
placenta
1
spinal cord
1
thyroid gland
1
uterus
Life stage
1
unknown
Date released
2
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
biosample_term_name!
luminal epithelial cell of mammary gland
Showing 3 of 3 results
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Download
FileSet
DSR005XGT
released
Annotation file set
: Target gene predictions for BSS00307 epithelial cell of esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR738CKV
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR513MXE
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE