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Schema
Citing CMDGA
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Annotation type
2
gene expression
1
accessible chromatin
1
binding sites
1
caQTL
1
histone modifications
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Target gene links
Annotation type Category
2
RNA-seq
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
5
aorta
4
coronary artery
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
3
Afferent / Efferent Arteriole Endothelial Cell
3
Degenerative Peritubular Capillary Endothelial Cell
3
Glomerular Capillary Endothelial Cell
3
Peritubular Capillary Endothelial Cell
3
ascending aorta
3
smooth muscle cell of the coronary artery
3
tibial artery
2
dermis blood vessel endothelial cell
2
thoracic aorta
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
pancreatic endothelial cell
1
pulmonary artery endothelial cell
1
whole blood
Organ
3
artery
3
blood vessel
3
heart
3
vasculature
Life stage
2
adult
Date released
1
February, 2020
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR938TKW
released
Annotation file set
: Gene expression annotation of smooth muscle cell of the coronary artery for GSE113348
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR277QFW
released
Annotation file set
: Gene expression levels of Coronary artery smooth muscle cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP