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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
2
chromatin state
2
histone modifications
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
megakaryocyte
1
stromal cell of bone marrow
Organ
334
epithelium
166
connective tissue
125
kidney
118
brain
109
pancreas
107
musculature of body
96
embryo
94
intestine
93
lung
75
heart
69
bodily fluid
69
limb
68
eye
67
blood
67
vasculature
61
uterus
57
skin of body
54
large intestine
51
blood vessel
45
extraembryonic component
45
liver
38
stomach
31
bone element
28
adrenal gland
26
mammary gland
26
small intestine
21
placenta
20
adipose tissue
20
prostate gland
19
artery
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
1
trachea
Life stage
1
unknown
Date released
2
January, 2021
1
May, 2020
1
November, 2021
1
September, 2022
Software used
2
macs
1
chicago
1
cicero
1
r
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
2
AMP
2
T1D
1
ENCODE
RFA
2
AMP
2
T1D
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP