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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
2
chromatin state
2
histone modifications
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
1
pCHi-C
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
megakaryocyte
2
mononuclear cell of bone marrow
1
stromal cell of bone marrow
Organ
165
epithelium
109
connective tissue
103
bodily fluid
100
blood
97
embryo
92
brain
87
lung
87
musculature of body
82
kidney
79
intestine
62
skin of body
62
uterus
54
heart
52
vasculature
51
limb
50
large intestine
49
pancreas
41
blood vessel
39
extraembryonic component
34
liver
31
mammary gland
30
stomach
24
bone element
23
prostate gland
23
small intestine
21
adrenal gland
21
lymph node
20
placenta
18
penis
15
adipose tissue
15
eye
15
thymus
14
artery
14
gonad
13
ureter
11
spinal cord
10
esophagus
10
pituitary gland
9
spleen
7
ovary
7
testis
7
vein
6
lymphoid tissue
6
thyroid gland
5
bone marrow
5
bronchus
5
lymphatic vessel
4
mouth
3
breast
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
trachea
2
vagina
1
nose
Life stage
1
unknown
Date released
2
February, 2021
1
January, 2021
1
May, 2020
1
September, 2022
Software used
2
macs
1
chicago
1
cicero
1
r
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
Showing 5 of 5 results
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Download
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR410ARI
released
Annotation file set
: Binding sites annotation for Blood Bone_marrow_nuclear_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR709WIF
released
Annotation file set
: Binding sites annotation for Blood Bone_marrow_mononuclear_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP