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Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
variant allelic effects
1
chromatin state
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
tissue
3
primary cell
Biosample term
2
smooth muscle cell of the esophagus
1
epithelial cell of esophagus
Organ
117
epithelium
76
embryo
66
connective tissue
57
bodily fluid
56
uterus
55
blood
41
skin of body
34
lung
29
brain
29
pancreas
19
mammary gland
18
vasculature
16
intestine
16
kidney
13
bone element
13
prostate gland
12
blood vessel
12
extraembryonic component
11
large intestine
11
penis
10
liver
10
musculature of body
10
pituitary gland
9
lymph node
8
heart
4
adrenal gland
4
eye
4
stomach
4
vein
3
artery
3
bone marrow
3
bronchus
3
esophagus
3
lymphatic vessel
2
gonad
2
limb
2
lymphoid tissue
2
mouth
2
placenta
2
small intestine
1
adipose tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thyroid gland
Life stage
1
unknown
Date released
2
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
biosample_type!
tissue
Showing 3 of 3 results
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Download
FileSet
DSR005XGT
released
Annotation file set
: Target gene predictions for BSS00307 epithelial cell of esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR738CKV
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR513MXE
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE