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Citing CMDGA
Clear Filters
Annotation type
8
accessible chromatin
7
target gene predictions
2
gene expression
2
variant allelic effects
1
eQTL
Annotation Category
7
Target gene links
Annotation type Category
25
DNase-seq
ChIP-seq
6
ATAC-seq
2
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
4
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Biosample term
2
stomach
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
parietal cell
1
peptic cell
1
stomach neuroendocrine cell
Organ
74
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
31
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
liver
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
1
urinary bladder
Date released
4
November, 2021
2
May, 2021
1
March, 2020
Software used
6
abc
1
nospecificsoft_customcode
Lab
4
Bing Ren, UCSD
2
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
4
ENCODE
3
AMP
RFA
4
ENCODE3
3
AMP
annotation_type_category!
ChIP-seq
Showing 7 of 7 results
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Download
FileSet
DSR283LYA
released
Annotation file set
: Target gene predictions of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR212MAT
released
Annotation file set
: Target gene predictions of Gastric Neuroendocrine Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR165IBQ
released
Annotation file set
: Target gene predictions of Foveolar Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR771TGI
released
Annotation file set
: Target gene predictions of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR001ISW
released
Annotation file set
: A target gene prediction annotation in Human Gastric of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP