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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
4
Target gene links
1
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
4
endothelial cell of umbilical vein
1
vein endothelial cell
Organ
150
epithelium
124
brain
103
connective tissue
95
embryo
87
musculature of body
82
bodily fluid
82
lung
81
intestine
81
kidney
79
blood
60
uterus
57
skin of body
55
heart
51
limb
50
pancreas
49
large intestine
41
extraembryonic component
39
vasculature
35
liver
31
blood vessel
31
stomach
24
mammary gland
23
small intestine
22
bone element
22
prostate gland
21
adrenal gland
20
placenta
16
penis
15
thymus
14
adipose tissue
13
artery
13
eye
13
lymph node
13
ureter
12
gonad
11
pituitary gland
10
esophagus
9
spinal cord
8
spleen
7
lymphoid tissue
7
ovary
6
thyroid gland
5
bone marrow
5
testis
5
vein
4
bronchus
4
lymphatic vessel
4
mouth
3
breast
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
trachea
2
vagina
1
nose
Life stage
2
newborn
Date released
2
September, 2022
1
February, 2021
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
1
macs
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118QJN
released
Annotation file set
: Histone modifications annotation for Uterus TIVE-LTC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP