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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
chromatin state
4
target gene predictions
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
HiC
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
20
heart
19
A549
19
HFFc6
18
CD14-positive monocyte
17
adrenal gland
17
lung
17
small intestine
16
brain
16
muscle of arm
15
placenta
14
kidney
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
11
common myeloid progenitor, CD34-positive
11
right lung
10
liver
10
pituitary stalk
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
pericyte cell
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
GM12878
8
H9
8
adipose tissue
8
psoas muscle
8
spinal cord
8
spleen
7
endothelial cell
7
heart left ventricle
lymphocyte
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
MCF-7
6
dendritic cell
6
olfactory receptor cell
6
ovary
5
CD8-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
adipocyte
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
mononuclear cell
5
muscle of trunk
5
natural killer cell
5
neural progenitor cell
5
pancreas
5
thyroid gland
5
transverse colon
4
CyT49
4
HUES8
4
aorta
4
chorionic villus
4
endothelial cell of umbilical vein
4
fibroblast
4
foreskin keratinocyte
4
iPSC derived cell line
4
macrophage
4
mesenchymal stem cell
4
pancreatic delta cell
3
CD4-positive, alpha-beta T cell
3
CD4-positive, alpha-beta memory T cell
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
T cell
3
astrocyte
3
breast epithelium
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
colon epithelial cell
3
coronary artery
3
endocrine pancreas
3
endometrium adenocarcinoma
3
esophagus
3
fibroblast of cardiac tissue
3
foreskin fibroblast
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
layer of hippocampus
3
luminal epithelial cell of mammary gland
3
mammary gland epithelial cell
3
mesendoderm
3
monocyte
3
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
regulatory T cell
3
retina
3
skin fibroblast
3
testis
3
tibial nerve
3
trophoblast
3
type B pancreatic cell
3
upper lobe of left lung
2
A673
2
Ammon's horn
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
SK-N-DZ
2
T-cell
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
cardiac muscle cell
2
cerebellum
2
chorion membrane
2
cingulate gyrus
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
erythroblast
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of dermis
2
fibroblast of lung
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
iPS DF 19.11
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive T cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skeletal muscle tissue
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
type II pneumocyte
Organ
4
blood vessel
4
vasculature
Life stage
3
adult
Date released
2
March, 2020
2
September, 2022
Software used
2
r
1
hiccups
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
unknown
biosample_term_name!
lymphocyte
Showing 4 of 4 results
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Download
FileSet
DSR647LQQ
released
Annotation file set
: Target gene predictions for BSS00080 aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR201HPG
released
Annotation file set
: Target gene predictions for BSS00079 aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428FCH
released
Annotation file set
: A target gene prediction annotation in aorta of DSR073ZJB Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR452SBJ
released
Annotation file set
: A target gene prediction annotation in Human Aorta of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP