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Schema
Citing CMDGA
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Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
endothelial cell of umbilical vein
Organ
122
epithelium
83
embryo
79
musculature of body
77
lung
76
connective tissue
75
kidney
74
brain
71
intestine
58
uterus
57
bodily fluid
55
blood
49
limb
46
heart
44
skin of body
43
large intestine
43
pancreas
36
extraembryonic component
30
vasculature
29
stomach
24
blood vessel
22
small intestine
20
adrenal gland
20
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
13
thymus
13
ureter
12
adipose tissue
11
penis
10
gonad
10
pituitary gland
9
esophagus
9
eye
9
lymph node
9
spinal cord
8
artery
7
spleen
6
lymphoid tissue
6
ovary
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
2
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
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nospecificsoft_customcode
Showing 4 of 4 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP