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Schema
Citing CMDGA
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Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
0
gene expression
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
bronchial goblet cell
Organ
279
epithelium
203
kidney
62
connective tissue
59
pancreas
51
vasculature
34
blood vessel
31
brain
29
heart
26
liver
17
musculature of body
16
adipose tissue
13
limb
12
artery
10
embryo
6
intestine
4
bone element
4
esophagus
4
nerve
4
stomach
3
eye
3
lymphatic vessel
3
skin of body
3
ureter
2
adrenal gland
2
gonad
2
large intestine
2
lung
2
prostate gland
2
thyroid gland
2
uterus
2
vein
1
blood
1
bodily fluid
1
breast
1
bronchus
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pituitary gland
1
spinal cord
1
spleen
1
testis
1
tongue
1
urinary bladder
1
vagina
Date released
1
February, 2024
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
relevant_life_stage!
fetal
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FileSet
DSR915JYD
released
Annotation file set
: Variant allelic effects annotation of Airway goblet cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP