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Citing CMDGA
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Annotation type
31
target gene predictions
17
accessible chromatin
4
variant allelic effects
Annotation Category
4
Genetic variant effects
Annotation type Category
7
snATAC-seq
5
DNase-seq
4
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
Biosample term
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
adipose tissue
1
subcutaneous adipose tissue
Organ
4
connective tissue
3
blood vessel
3
heart
3
vasculature
2
adipose tissue
2
artery
2
epithelium
2
limb
2
pancreas
1
liver
1
nerve
Date released
4
May, 2020
Software used
4
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR980SZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in preadipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088HBN
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose subcutaneous ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP