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Schema
Citing CMDGA
Clear Filters
Annotation type
29
accessible chromatin
28
target gene predictions
2
caQTL
1
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
2
ATAC-seq
1
SNP-SELEX
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
CD4-positive helper T cell
1
purified protein and synthetic DNA oligo binding assay
Date released
2
October, 2022
1
February, 2023
Software used
2
matrix-eQTL
1
betacells_cytokines_t1d
Lab
2
Stephen S. Rich Lab @UVA
1
Kyle Gaulton, UCSD
Project
150
AMP
3
T1D
RFA
3
T1D
Showing 3 of 3 results
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FileSet
DSR976GBT
released
Annotation file set
: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D