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Schema
Citing CMDGA
Clear Filters
Annotation type
1647
candidate regulatory elements
1313
target gene predictions
971
histone modifications
927
chromatin state
848
accessible chromatin
812
binding sites
635
gene expression
156
eQTL
134
differential activity
129
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
2
Others
Annotation type Category
1
ChIP-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
2
tissue
1
Pancreatic islets
1
naive thymus-derived CD4-positive, alpha-beta T cell
Organ
pancreas
Life stage
1
adult
Date released
1
August, 2020
1
August, 2022
1
May, 2020
1
May, 2021
1
November, 2019
Software used
2
combined S2G strategy
1
limix
1
macs
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
organ_slims!
pancreas
Showing 5 of 5 results
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Download
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619JSP
released
Annotation file set
: Variant to gene predictions in UK biobank
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP