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Schema
Citing CMDGA
Clear Filters
Annotation type
113
candidate regulatory elements
63
target gene predictions
10
accessible chromatin
8
histone modifications
6
binding sites
4
chromatin state
3
gene expression
3
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
59
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
1
colonic mucosa
1
duodenal mucosa
1
mucosa of rectum
1
rectum smooth muscle tissue
Organ
7
connective tissue
6
brain
4
intestine
4
pancreas
3
epithelium
3
large intestine
3
liver
3
musculature of body
2
adipose tissue
2
blood
2
bodily fluid
1
blood vessel
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
vasculature
1
vein
Date released
4
August, 2017
Software used
4
chromhmm
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
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Download
FileSet
TSTSR459407
released
Annotation file set
: ChromHMM 13-state model for duodenum mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR362251
released
Annotation file set
: ChromHMM 13-state model for Rectal mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR420347
released
Annotation file set
: ChromHMM 13-state model for Colonic mucosa
Lab:
Stephen Parker, UMich
Project:
AMP