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Citing CMDGA
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Annotation type
29
candidate regulatory elements
14
target gene predictions
7
gene expression
3
eQTL
3
histone modifications
2
pQTL
1
accessible chromatin
1
binding sites
1
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
3
RNA-seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
10
islet of Langerhans
6
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
skeletal muscle tissue
1
endothelial cell
1
kidney
1
mesenchymal stem cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
omental fat pad
1
progenitor cell
1
renal glomerulus
1
smooth muscle cell
1
synovial joint
1
type I muscle cell
1
type II muscle cell
Organ
2
connective tissue
1
kidney
Life stage
2
adult
Date released
3
August, 2021
Software used
2
fastqtl
2
peer
1
matrix-eQTL
Lab
2
ITG
1
Katalin Susztak, Upenn
Project
2
ITG
1
AMP
RFA
2
ITG
1
AMP2
assembly!
GRCh38
Showing 3 of 3 results
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FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP