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Schema
Citing CMDGA
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Annotation type
29
candidate regulatory elements
14
target gene predictions
7
gene expression
2
eQTL
2
histone modifications
1
accessible chromatin
1
binding sites
1
variant allelic effects
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
10
islet of Langerhans
6
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
skeletal muscle tissue
1
endothelial cell
1
kidney
1
mesenchymal stem cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
omental fat pad
1
progenitor cell
1
renal glomerulus
1
smooth muscle cell
1
synovial joint
1
type I muscle cell
1
type II muscle cell
Organ
2
kidney
1
epithelium
Life stage
1
adult
Date released
1
August, 2021
1
February, 2024
Software used
2
matrix-eQTL
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
assembly!
GRCh38
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR651LEH
released
Annotation file set
: cis-eQTLs of tubulointerstitial in NEPTUNE cohort
Lab:
AMP-T2D consortium
Project:
AMP