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Schema
Citing CMDGA
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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
stem cell
Biosample term
66
heart
66
stomach
56
kidney
52
brain
51
lung
50
muscle of arm
49
CD8-positive, alpha-beta T cell
47
adrenal gland
47
small intestine
45
placenta
43
large intestine
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
liver
37
islet of Langerhans
37
thymus
34
right lung
33
B cell
33
hematopoietic multipotent progenitor cell
31
right kidney
30
monocyte
30
renal cortex interstitium
30
renal pelvis
27
CD14-positive monocyte
27
left kidney
25
adipose tissue
25
spleen
24
adipocyte
23
CD4-positive, alpha-beta memory T cell
23
regulatory T cell
22
endothelial cell
22
heart left ventricle
22
spinal cord
21
epithelial cell of proximal tubule
20
neural progenitor cell
19
T-helper 1 cell
19
glomerular endothelial cell
19
hepatocyte
19
natural killer cell
18
foreskin keratinocyte
18
pancreatic ductal cell
17
T-helper 17 cell
17
sigmoid colon
17
trophoblast cell
16
body of pancreas
16
mesenchymal stem cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
embryonic stem cell
15
endothelial cell of umbilical vein
15
foreskin fibroblast
15
pancreas
15
psoas muscle
14
gastrocnemius medialis
14
mononuclear cell
14
pancreatic alpha cell
14
tibial nerve
14
transverse colon
13
CD4-positive, alpha-beta T cell
13
T-helper 2 cell
13
caudate nucleus
13
fibroblast of lung
13
heart right ventricle
13
mammary epithelial cell
13
muscle of trunk
13
osteoblast
13
pancreatic beta cell
13
pancreatic delta cell
13
skeletal muscle myoblast
13
skeletal muscle tissue
13
subcutaneous adipose tissue
13
testis
13
thyroid gland
13
upper lobe of left lung
12
T cell
12
chorionic villus
12
layer of hippocampus
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neutrophil
11
Peyer's patch
11
cardiac muscle cell
11
cardiomyocytes
11
endocrine pancreas
11
keratinocyte
11
mammary gland epithelial cell
11
pancreatic acinar cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
neuronal stem cell
10
neurosphere
10
prostate gland
10
smooth muscle cell
9
aorta
9
breast epithelium
9
coronary artery
9
esophagus squamous epithelium
9
extended pluripotent stem (EPS) cells
9
fibroblast
9
fibroblast of dermis
9
induced pluripotent stem cell
9
left renal cortex interstitium
9
left renal pelvis
9
macrophage
9
mature neutrophil
9
omental fat pad
8
T-cell acute lymphoblastic leukemia
8
ascending aorta
8
cardiomyocytes (cardiac muscle cell)
8
cerebellum
8
colonic mucosa
8
dermis blood vessel endothelial cell
8
esophagus muscularis mucosa
8
foreskin melanocyte
8
frontal cortex
8
lower leg skin
8
mesendoderm
8
naive thymus-derived CD8-positive, alpha-beta T cell
8
progenitor cell of endocrine pancreas
8
right atrium auricular region
8
right renal pelvis
8
temporal lobe
8
trophoblast
7
chorion membrane
7
cingulate gyrus
7
dendritic cell
7
duodenal mucosa
7
epithelial cell of prostate
7
esophagus
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
7
memory B cell
7
mucosa of rectum
7
neuroblastoma cell line
7
substantia nigra
7
tibial artery
6
Ammon's horn
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
angular gyrus
6
astrocyte
6
cardiac precursors (cardiac muscle cell)
6
endodermal cell
6
erythroblast
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
gamma-delta T cell
6
gastroesophageal sphincter
6
globus pallidus
6
hepatic stellate cell
6
kidney glomerular epithelial cell
6
limb
6
mesodermal cell
6
midbrain
6
muscle layer of duodenum
6
naive T cell
6
neural cell
6
occipital lobe
6
pancreatic stellate cell
6
parathyroid adenoma
6
right renal cortex interstitium
6
skeletal muscle satellite cell
6
thoracic aorta
6
tongue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
Organ
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
organ_slims!
eye
biosample_type!
cell line
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP