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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
6
hg19
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
16
ovary
14
testis
5
NT2-D1 cell
1
NT2/D1
1
somatic gonadal cell
Disease term
2
testicular embryonal carcinoma
Organ
5
gonad
5
testis
Life stage
2
unknown
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
October, 2022
Software used
2
macs
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
assembly!
GRCh38
Showing 5 of 5 results
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Download
FileSet
DSR209NBR
released
Annotation file set
: Binding sites annotation for NT2-D1 cell (NT2-D1) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR464YWC
released
Annotation file set
: Candidate regulatory elements for BSS01386 NT2-D1 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR598KKZ
released
Annotation file set
: Target gene predictions for BSS01386 NT2-D1 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR556ACO
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815ZSB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP